In all restart calculations a normal input file must be supplied (you can, for instance, simply take the original one), with a specification of the restart file added: the restart file does not replace the input file. From the program's point of view, it first reads the 'normal' input file and then inspects whether a restart file is present to replace some of the information read from input.
The concept of restarts in adf is rather simple and primarily directed at increasing computational efficiency by providing cost-expensive data. The continuation run is to a large extent independent from the one that generated the restart file. The runtype, the choice of density-functional and other features in the Hamiltonian, precision of numerical integration, thresholds on convergence, et cetera are all determined solely from the input file for the new run: no such data is read from the restart file. Most input items should, therefore, be supplied in the restart run again, even if it is a direct continuation of a previous calculation: omission implies using the standard defaults, which are not necessarily the settings of the calculation that generated the restart file.
Even the key ATOMS with the list of atomic coordinates must be supplied again: the program needs the information herein to deduce what fragments are used, which coordinates are free or frozen respectively in an optimization, etc. The coordinate values may be supplied with the restart file and these will then overwrite those specified in the input file.
Obviously, the two runs cannot be completely unrelated. To let the restart data make sense the runs should correspond to the same molecule (i.e. its general definition in terms of fragment building blocks). The program does not check all aspects related to this and certain abuses will therefore survive the internal tests, but will surely lead to some error later on: it is the user's responsibility to ensure that the restart data match the calculation one has in mind.
Interdependencies between data read from the restart file (rather than from input or fragment files) and other items imply that some input keys and some options to specific keys may be inaccessible when restart data are provided. In most cases supplying such inaccessible input options will simply be ignored; in some cases a warning is issued or an error abort occurs.
A restart file supplies data from a previous run that might be useful in the current one. The applications are (combinations are possible):
WARNING. The SCF and optimization procedures use history to improve convergence behavior. Most of such history information is not stored on a restart file. As a consequence, a restart may not continue exactly as the original run would have done if it hadn't terminated. In a SCF restart, for instance, the DIIS procedure has to rebuild the information. The same holds for geometry optimizations, although history plays usually not a very big role there.
