prev
up
next

Step 4: Search the transition state

A minimum has vanishing gradients and only positive eigen modes. A (first-order) transition state (saddle point) is characterized by having one negative mode. With a transition state search the optimizer will go uphill in the direction of the lowest (nonzero) eigenmode and downhill in all other degrees of freedom. In our example it would follow mode 8. Let us give it a try from the minimum.

Choose in the 'Main Options' panel the task 'TransitionState'

We have just calculated a Hessian (with the frequency run) so we'd better use it.

Go to the 'Optimization' panel, click on the
   plus button next to 'Initial Hessian From:'
Select with the file dialog 'H3_freq.runkf'.
Save the  project as 'H3_ts' and run it.

The most likely outcome, however, is that the optimizer stops immediately, because the gradients are zero. Therefore, we need to help the optimizer a bit.

Move the rightmost atom a tiny bit to the right (increase the x value by 0.01).

(Here I increased the values next to H(3)).

Run it again, and now it will run for more cycles.
After it has finished, open adfmovie

The last frame looks like

The third H atom ends up exactly in the middle of the (repeated) H1 and H2 atoms. Let us finally check that we are indeed in the transition state.

In the 'Main Options' panel select the task 'Frequencies'
Save the project as 'H3_ts_freq' and run it.
Afterwards, open adfspectra and click on the 'NormalModes' menu

You should see

We have found a geometry with vanishing gradients with one weak negative vibrational mode. We have succeeded in finding a transition state.

SCM Home Page
Quality Software. Quantum Science
*
*
Copyright Terms of UsePrivacy Policy
Home Products Try & Buy Downloads Documentation Support News About SCM Contact
Home     Products     Try & Buy     Downloads     Documentation     Support     News     About SCM     Contact