Contents GUI Tutorials
Table of Contents
Introduction
.. Starting the GUI: start ADFjobs
.. GUI modules (for the ADF-GUI, BAND-GUI, COSMO-RS GUI, ReaxFF-GUI, and so on)
.. Keyboard shortcuts
ADF-GUI overview tutorials
.. Tutorial 1: Geometry optimization of ethanol
.. Tutorial 2: Building Molecules
.. Tutorial 3: Building Crystals and Slabs
.. Tutorial 4: Excitation energies of ethene
.. Tutorial 5: Vibrational frequencies of ethane
Advanced ADF-GUI tutorials
.. Tutorial 6: HCN Isomerization Reaction
.. Tutorial 7: TlH (thallium hydride) Spin-Orbit Coupling
.. Tutorial 8: Multi-Level principles: Regions, QUILD and QMMM
.. Tutorial 9: ADF Fragment Analysis
.. Tutorial 10: Basis Set Effects for NH
3
(ammonia) Geometry
.. Tutorial 11: Caffeine Bader (AIM) analysis, Benzene NBO visualization and Occupations
.. Tutorial 12: Spin Coupling in Fe
4
S
4
Cluster
BAND-GUI tutorials
.. Tutorial 1: with a grain of salt
.. Tutorial 2: a transition state search
.. Tutorial 3: a transition state search with a partial Hessian*
DFTB-GUI tutorials
.. Tutorial 1: DFTB charges, frequencies and dynamics (MD)
.. Tutorial 2: Periodic DFTB, Lattice Optimization, DOS, band structure and phonons
.. Tutorial 3: Proton affinities with third order DFTB (DFTB3)
MOPAC-GUI tutorial
.. Tutorial 1: Toluene charges, movies, frequencies and normal modes
ReaxFF-GUI tutorials
.. Tutorial 1: Burning methane
.. Tutorial 2: Water on an aluminum surface
COSMO-RS GUI Tutorials
.. Tutorial 1: COSMO result files
.. Tutorial 2: COSMO-RS overview: analysis
.. Tutorial 3: COSMO-RS overview: properties
.. Tutorial 4: Examples using the COSMO-RS database
.. Tutorial 5: p
K
a
values
ADF-GUI overview tutorials
Tutorial 1: Geometry optimization of ethanol
Step 1: Preparations
Step 2: Create your molecule
Step 3: Select calculation options
Step 4: Run your calculation
Step 5: Results of your calculation
Tutorial 2: Building Molecules
Step 1: Start ADFinput
Step 2: Search for ethanol
Step 3: Import XYZ for ethanol
Step 4: Import SMILES string
Step 5: Build ethanol using the structure tool
Step 6: Building a peptide chain using the structures tool
Step 7: Metal complexes and ligands
Step 8: Your own structures library
Step 9: A sphere of Cu atoms, cut out of the crystal
Tutorial 3: Building Crystals and Slabs
The Crystal Structure Database
Crystal builder (from space group information)
Slicer: building slabs
Enlarging the unit cell
Tutorial 4: Excitation energies of ethene
Step 1: Start ADFinput
Step 2: Create your ethene molecule
Step 3: Optimize the geometry
Step 4: Calculate the excitation energies
Step 5: Results of your calculation
Tutorial 5: Vibrational frequencies of ethane
Step 1: Start ADFinput
Step 2: Create your ethane molecule
Step 3: Optimize the geometry
Step 4: Calculate the vibrational frequencies of ethane
Step 5: Results of your calculation
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